Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhga3Q91XY5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12403-201ENSMUST00000121384 959 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gm2423-201ENSMUST00000074863 733 ntBASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga3Q91XY5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Gm15678-201ENSMUST00000117573 960 ntBASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Gm12859-201ENSMUST00000117834 427 ntBASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms