Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm13732-201ENSMUST00000117753 535 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm13689-201ENSMUST00000119360 685 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm38144-201ENSMUST00000192790 465 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb17Q91VD8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb17Q91VD8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm12490-201ENSMUST00000120255 560 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm15530-201ENSMUST00000122206 555 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm12091-201ENSMUST00000146791 830 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm23984-201ENSMUST00000157139 203 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm27701-201ENSMUST00000184498 110 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm38223-201ENSMUST00000194484 695 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm9517-201ENSMUST00000195021 874 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.02□□□□□ -0.17
Pcdhb17Q91VD8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb17Q91VD8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms