Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm15653-201ENSMUST00000119247 907 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Mir3113-201ENSMUST00000175478 76 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm27772-201ENSMUST00000184900 187 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm17971-201ENSMUST00000190239 806 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm21362-201ENSMUST00000194272 928 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.27□□□□□ -0.61
Tram1Q91V04 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.27□□□□□ -0.61
Tram1Q91V04 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Tram1Q91V04 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tram1Q91V04 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tram1Q91V04 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm25287-201ENSMUST00000103846 110 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm22918-201ENSMUST00000103855 110 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.26□□□□□ -0.61
Tram1Q91V04 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm17330-201ENSMUST00000221047 165 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.26□□□□□ -0.61
Tram1Q91V04 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tram1Q91V04 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tram1Q91V04 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tram1Q91V04 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.25□□□□□ -0.61
Tram1Q91V04 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tram1Q91V04 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms