Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm12341-201ENSMUST00000119724 503 ntBASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4aQ8VEJ9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Mir874-201ENSMUST00000104769 76 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm17420-201ENSMUST00000164753 153 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Vps4aQ8VEJ9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms