Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm12957-201ENSMUST00000117835 377 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm24644-201ENSMUST00000157114 139 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm22331-201ENSMUST00000158066 136 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm8810-201ENSMUST00000172895 754 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm45784-201ENSMUST00000188360 142 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm8598-201ENSMUST00000221184 836 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.03□□□□□ -0.32
Retreg1dQ8VE91 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retreg1dQ8VE91 Gm12742-201ENSMUST00000117326 410 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm27731-201ENSMUST00000185192 107 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm29127-201ENSMUST00000188304 517 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm43630-201ENSMUST00000201550 776 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Gm9899-201ENSMUST00000065519 555 ntBASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg1dQ8VE91 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gm14660-201ENSMUST00000119809 575 ntBASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Proscos-202ENSMUST00000178990 666 ntBASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg1dQ8VE91 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms