Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtn1Q8K0T0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn1Q8K0T0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm13369-201ENSMUST00000119442 987 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm22331-201ENSMUST00000158066 136 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm27847-201ENSMUST00000183711 107 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm27375-201ENSMUST00000183799 107 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm6091-201ENSMUST00000098307 165 ntBASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn1Q8K0T0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm8805-201ENSMUST00000117848 313 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm24644-201ENSMUST00000157114 139 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms