Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Gm31256-201ENSMUST00000194705 506 ntBASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trpm6Q8CIR4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Gm12997-201ENSMUST00000120207 640 ntBASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Gm5904-201ENSMUST00000210286 865 ntBASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Gm22058-201ENSMUST00000083393 310 ntBASIC13.08□□□□□ -0.31
Trpm6Q8CIR4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm25214-201ENSMUST00000104573 129 ntBASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm3096-201ENSMUST00000185770 364 ntBASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trpm6Q8CIR4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trpm6Q8CIR4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms