Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm24447-201ENSMUST00000083977 338 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm6091-201ENSMUST00000098307 165 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CopaQ8CIE6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CopaQ8CIE6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CopaQ8CIE6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm13226-201ENSMUST00000117838 404 ntBASIC13.39□□□□□ -0.27
CopaQ8CIE6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm27847-201ENSMUST00000183711 107 ntBASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm27375-201ENSMUST00000183799 107 ntBASIC13.39□□□□□ -0.27
CopaQ8CIE6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm10012-201ENSMUST00000078252 192 ntBASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.39□□□□□ -0.27
CopaQ8CIE6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CopaQ8CIE6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopaQ8CIE6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.38□□□□□ -0.27
CopaQ8CIE6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm38671-201ENSMUST00000200573 130 ntBASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms