Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab43Q8CG50 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab43Q8CG50 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm11964-201ENSMUST00000120982 444 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm16570-201ENSMUST00000161951 436 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm8738-201ENSMUST00000172606 329 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.77□□□□□ -0.37
Rab43Q8CG50 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.77□□□□□ -0.37
Rab43Q8CG50 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab43Q8CG50 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.76□□□□□ -0.37
Rab43Q8CG50 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Gm6082-201ENSMUST00000215204 454 ntBASIC12.76□□□□□ -0.37
Rab43Q8CG50 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.76□□□□□ -0.37
Rab43Q8CG50 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.76□□□□□ -0.37
Rab43Q8CG50 Mir433-201ENSMUST00000093564 124 ntBASIC12.76□□□□□ -0.37
Rab43Q8CG50 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab43Q8CG50 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Gm17376-201ENSMUST00000166016 84 ntBASIC12.75□□□□□ -0.37
Rab43Q8CG50 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Gm18827-201ENSMUST00000188341 790 ntBASIC12.75□□□□□ -0.37
Rab43Q8CG50 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms