Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc28bQ8CEG5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm12585-201ENSMUST00000117307 290 ntBASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm43474-201ENSMUST00000196415 774 ntBASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc28bQ8CEG5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm17330-201ENSMUST00000221047 165 ntBASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc28bQ8CEG5 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms