Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Gm8227-201ENSMUST00000223306 571 ntBASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc17Q8CE13 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Gm16379-201ENSMUST00000161469 348 ntBASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Gm8762-201ENSMUST00000193486 339 ntBASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Gm37259-201ENSMUST00000193903 849 ntBASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ccdc17Q8CE13 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Mir3547-201ENSMUST00000175461 88 ntBASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc17Q8CE13 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms