Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc178Q8CDV0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm6152-201ENSMUST00000151704 340 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Itm2b-204ENSMUST00000228637 783 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Gm26315-201ENSMUST00000083890 321 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc178Q8CDV0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gm6091-201ENSMUST00000098307 165 ntBASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc178Q8CDV0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc178Q8CDV0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms