Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gm18062-201ENSMUST00000208020 547 ntBASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gm18055-201ENSMUST00000208254 547 ntBASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vcpip1Q8CDG3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vcpip1Q8CDG3 Rubie-203ENSMUST00000227803 2430 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms