Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm26308-201ENSMUST00000157768 69 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm27680-201ENSMUST00000184192 160 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm38144-201ENSMUST00000192790 465 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Matn2-203ENSMUST00000226766 3252 ntBASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm44124-201ENSMUST00000204159 472 ntBASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lysmd4Q8CC84 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm14767-201ENSMUST00000121559 586 ntBASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms