Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx1Q8C8B0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Gm12742-201ENSMUST00000117326 410 ntBASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Gm7809-201ENSMUST00000153199 742 ntBASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Alx1Q8C8B0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm13392-201ENSMUST00000117708 150 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm8062-201ENSMUST00000139696 444 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm23363-201ENSMUST00000175024 79 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm38092-201ENSMUST00000195600 653 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm19184-201ENSMUST00000196798 928 ntBASIC15.23■□□□□ 0.03
Alx1Q8C8B0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx1Q8C8B0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm3890-201ENSMUST00000182416 207 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm37008-201ENSMUST00000195712 319 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm18584-201ENSMUST00000203098 964 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms