Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12624-201ENSMUST00000177615 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12621-201ENSMUST00000177760 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12615-201ENSMUST00000177970 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12622-201ENSMUST00000177975 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12627-201ENSMUST00000178412 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12625-201ENSMUST00000179122 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12614-201ENSMUST00000179586 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm12613-201ENSMUST00000180323 382 ntBASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a6Q8C6K9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gm23699-201ENSMUST00000158835 135 ntBASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 AU022133-201ENSMUST00000200601 873 ntBASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a6Q8C6K9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Daam2-202ENSMUST00000224595 1926 ntBASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a6Q8C6K9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Gm12208-201ENSMUST00000122004 163 ntBASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms