Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Gm10146-201ENSMUST00000072739 309 ntBASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc60Q8C4J0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm4271-201ENSMUST00000174444 973 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.69■□□□□ 0.26
Ccdc60Q8C4J0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc60Q8C4J0 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Gm13829-201ENSMUST00000119600 138 ntBASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Gm16177-201ENSMUST00000120728 718 ntBASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Gm16479-201ENSMUST00000121706 932 ntBASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms