Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.99□□□□□ -0.65
Tsen54Q8C2A2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm25144-201ENSMUST00000179561 110 ntBASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm25352-201ENSMUST00000179815 110 ntBASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm27622-201ENSMUST00000183779 60 ntBASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tsen54Q8C2A2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Gm6222-201ENSMUST00000120787 396 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 AA543401-201ENSMUST00000164248 1269 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Gm28630-201ENSMUST00000187806 498 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms