Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.34□□□□□ -0.43
Ska3Q8C263 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ska3Q8C263 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.34□□□□□ -0.43
Ska3Q8C263 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ska3Q8C263 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ska3Q8C263 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm14350-201ENSMUST00000116642 640 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm16202-201ENSMUST00000117532 544 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm44069-201ENSMUST00000204898 506 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm8598-201ENSMUST00000221184 836 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm10012-201ENSMUST00000078252 192 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska3Q8C263 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ska3Q8C263 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.33□□□□□ -0.44
Ska3Q8C263 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ska3Q8C263 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ska3Q8C263 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ska3Q8C263 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska3Q8C263 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.32□□□□□ -0.44
Ska3Q8C263 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms