Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Itm2b-204ENSMUST00000228637 783 ntBASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf3Q8C120 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Gm11918-201ENSMUST00000121660 179 ntBASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf3Q8C120 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Gm6152-201ENSMUST00000151704 340 ntBASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Gm9794-201ENSMUST00000202370 423 ntBASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf3Q8C120 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm12490-201ENSMUST00000120255 560 ntBASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms