Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trub1Q8C0D0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Mir686-201ENSMUST00000102174 109 ntBASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Proscos-202ENSMUST00000178990 666 ntBASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trub1Q8C0D0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Gm6458-201ENSMUST00000211573 635 ntBASIC13.49□□□□□ -0.25
Trub1Q8C0D0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trub1Q8C0D0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm11618-201ENSMUST00000117946 267 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm10156-201ENSMUST00000122364 462 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms