Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Mospd4-201ENSMUST00000180618 576 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm37489-201ENSMUST00000191883 159 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm38341-201ENSMUST00000195357 515 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm32025-201ENSMUST00000217960 307 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm13297-201ENSMUST00000120205 934 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm8738-201ENSMUST00000172606 329 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm2991-201ENSMUST00000173338 480 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm7046-201ENSMUST00000221351 977 ntBASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf2Q8BZT2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Mir874-201ENSMUST00000104769 76 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm4986-201ENSMUST00000119731 549 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms