Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp43Q8BUM9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp43Q8BUM9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm8810-201ENSMUST00000172895 754 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm8652-201ENSMUST00000181363 964 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms