Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Gm15920-201ENSMUST00000118998 402 ntBASIC12.67□□□□□ -0.38
Cpne3Q8BT60 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Gm26464-201ENSMUST00000157094 305 ntBASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Mir7023-201ENSMUST00000185093 64 ntBASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpne3Q8BT60 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Syt7-204ENSMUST00000223586 1344 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm14057-201ENSMUST00000120631 482 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm38144-201ENSMUST00000192790 465 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne3Q8BT60 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Gm15321-201ENSMUST00000121290 288 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms