Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf4Q8BQZ5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4Q8BQZ5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.71□□□□□ -0.38
Cpsf4Q8BQZ5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gm11478-201ENSMUST00000117851 599 ntBASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gm15429-201ENSMUST00000151268 798 ntBASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms