Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm11941-201ENSMUST00000119904 610 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm14665-201ENSMUST00000122294 557 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Mir6546-201ENSMUST00000184460 62 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm29615-201ENSMUST00000185371 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28224-201ENSMUST00000186078 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm29001-201ENSMUST00000186177 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28292-201ENSMUST00000186593 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28101-201ENSMUST00000187608 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm29076-201ENSMUST00000187689 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28302-201ENSMUST00000187931 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28646-201ENSMUST00000188220 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28205-201ENSMUST00000189177 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm29032-201ENSMUST00000189797 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm28695-201ENSMUST00000190300 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm37448-201ENSMUST00000192795 697 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col16a1Q8BLX7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.29
Col16a1Q8BLX7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Gm10076-201ENSMUST00000073238 384 ntBASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col16a1Q8BLX7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gm23251-201ENSMUST00000103773 110 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gm17391-201ENSMUST00000171036 126 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Col16a1Q8BLX7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms