Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdhr3Q8BL00 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm11524-201ENSMUST00000119349 807 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm27306-201ENSMUST00000183970 107 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm5279-201ENSMUST00000199575 745 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm19078-201ENSMUST00000206311 727 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.44□□□□□ -0.58
Cdhr3Q8BL00 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Gm37935-201ENSMUST00000192012 982 ntBASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms