Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm8515-201ENSMUST00000194852 576 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm44397-201ENSMUST00000195950 113 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm6983-201ENSMUST00000214912 628 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn3Q8BHH8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clrn3Q8BHH8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clrn3Q8BHH8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clrn3Q8BHH8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms