Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ush1gQ80T11 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ush1gQ80T11 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ush1gQ80T11 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ush1gQ80T11 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.33□□□□□ -0.11
Ush1gQ80T11 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ush1gQ80T11 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm14350-201ENSMUST00000116642 640 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm16202-201ENSMUST00000117532 544 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm13123-201ENSMUST00000122173 492 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm25668-201ENSMUST00000157700 129 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm20482-202ENSMUST00000174729 825 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.33□□□□□ -0.12
Ush1gQ80T11 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ush1gQ80T11 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm15370-201ENSMUST00000117158 253 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm4986-201ENSMUST00000119731 549 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm13297-201ENSMUST00000120205 934 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm18753-201ENSMUST00000201000 566 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm8227-201ENSMUST00000223306 571 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ush1gQ80T11 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.32□□□□□ -0.12
Ush1gQ80T11 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ush1gQ80T11 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ush1gQ80T11 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ush1gQ80T11 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms