Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Proscos-202ENSMUST00000178990 666 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm43947-201ENSMUST00000203019 959 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm21769-201ENSMUST00000211922 111 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm6152-201ENSMUST00000151704 340 ntBASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm17376-201ENSMUST00000166016 84 ntBASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf38bQ80SY5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.74□□□□□ -0.21
Prpf38bQ80SY5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms