Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.68□□□□□ -0.7
Vma21Q78T54 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.68□□□□□ -0.7
Vma21Q78T54 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.68□□□□□ -0.7
Vma21Q78T54 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.68□□□□□ -0.7
Vma21Q78T54 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
Vma21Q78T54 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vma21Q78T54 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Vma21Q78T54 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Vma21Q78T54 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Gm13223-201ENSMUST00000118609 747 ntBASIC10.67□□□□□ -0.7
Vma21Q78T54 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.67□□□□□ -0.7
Vma21Q78T54 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Vma21Q78T54 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.67□□□□□ -0.7
Vma21Q78T54 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Vma21Q78T54 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Vma21Q78T54 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vma21Q78T54 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.66□□□□□ -0.7
Vma21Q78T54 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm9522-201ENSMUST00000182394 926 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.66□□□□□ -0.7
Vma21Q78T54 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vma21Q78T54 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.66□□□□□ -0.7
Vma21Q78T54 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms