Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmed3Q78IS1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tmed3Q78IS1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Gm9013-201ENSMUST00000132939 882 ntBASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmed3Q78IS1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.88□□□□□ -0.67
Tmed3Q78IS1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.88□□□□□ -0.67
Tmed3Q78IS1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms