Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm4875-201ENSMUST00000118257 786 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm24513-201ENSMUST00000174964 138 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm44771-201ENSMUST00000206975 626 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gm27397-201ENSMUST00000184997 107 ntBASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Matn2-203ENSMUST00000226766 3252 ntBASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.91□□□□□ -0.34
Scaf4Q6PFF0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Gm7775-201ENSMUST00000218871 853 ntBASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms