Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nup98Q6PFD9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Gm14017-201ENSMUST00000121934 386 ntBASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Gm11930-201ENSMUST00000117788 190 ntBASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nup98Q6PFD9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.16■□□□□ 0.02
Nup98Q6PFD9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gm4909-201ENSMUST00000118749 794 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Rmrp-201ENSMUST00000157463 271 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Matn2-206ENSMUST00000228570 2798 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gm14999-201ENSMUST00000121039 624 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gm18212-201ENSMUST00000211678 889 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nup98Q6PFD9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.02
Nup98Q6PFD9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
Nup98Q6PFD9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Gm12015-201ENSMUST00000117065 843 ntBASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Gm32999-201ENSMUST00000192693 562 ntBASIC15.14■□□□□ 0.01
Nup98Q6PFD9 Gm3786-201ENSMUST00000202659 378 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms