Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf220Q6PDX6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf220Q6PDX6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf220Q6PDX6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm2445-201ENSMUST00000182798 989 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm27494-201ENSMUST00000184735 189 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms