Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm13612-201ENSMUST00000119276 390 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm11978-201ENSMUST00000122315 466 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm6152-201ENSMUST00000151704 340 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc2Q6PDG5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Gm8652-201ENSMUST00000181363 964 ntBASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Itm2b-204ENSMUST00000228637 783 ntBASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc2Q6PDG5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Gm11814-201ENSMUST00000119515 929 ntBASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Gm6266-201ENSMUST00000203844 806 ntBASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms