Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smchd1Q6P5D8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smchd1Q6P5D8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Gm25214-201ENSMUST00000104573 129 ntBASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smchd1Q6P5D8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm11222-201ENSMUST00000119005 738 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm17376-201ENSMUST00000166016 84 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm22058-201ENSMUST00000083393 310 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smchd1Q6P5D8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Mir3102-201ENSMUST00000175555 104 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms