Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Gm5035-201ENSMUST00000215581 927 ntBASIC13.29□□□□□ -0.28
Casc4Q6P2L7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casc4Q6P2L7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Mir874-201ENSMUST00000104769 76 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm6447-201ENSMUST00000118905 835 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Casc4Q6P2L7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Casc4Q6P2L7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm13612-201ENSMUST00000119276 390 ntBASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm8602-201ENSMUST00000184045 607 ntBASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm16372-201ENSMUST00000073088 450 ntBASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms