Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkp4Q68FH0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm5866-201ENSMUST00000177881 973 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.53□□□□□ -0.4
Pkp4Q68FH0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pkp4Q68FH0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.52□□□□□ -0.41
Pkp4Q68FH0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms