Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm25026-201ENSMUST00000175017 188 ntBASIC13.85□□□□□ -0.19
Scube3Q66PY1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm29127-201ENSMUST00000188304 517 ntBASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.85□□□□□ -0.19
Scube3Q66PY1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm11425-201ENSMUST00000119608 498 ntBASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm37922-201ENSMUST00000195596 455 ntBASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm37497-201ENSMUST00000195830 798 ntBASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm29705-201ENSMUST00000212598 474 ntBASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gm9396-201ENSMUST00000076703 567 ntBASIC13.84□□□□□ -0.19
Scube3Q66PY1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scube3Q66PY1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scube3Q66PY1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scube3Q66PY1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scube3Q66PY1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.83□□□□□ -0.2
Scube3Q66PY1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Gm16177-201ENSMUST00000120728 718 ntBASIC13.83□□□□□ -0.2
Scube3Q66PY1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 AY702102-202ENSMUST00000194651 1173 ntBASIC13.83□□□□□ -0.2
Scube3Q66PY1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scube3Q66PY1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms