Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ss18Q62280 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.67□□□□□ -0.86
Ss18Q62280 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.67□□□□□ -0.86
Ss18Q62280 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ss18Q62280 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.67□□□□□ -0.86
Ss18Q62280 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Ss18Q62280 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.67□□□□□ -0.86
Ss18Q62280 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ss18Q62280 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.67□□□□□ -0.86
Ss18Q62280 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ss18Q62280 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.67□□□□□ -0.86
Ss18Q62280 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.67□□□□□ -0.86
Ss18Q62280 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.67□□□□□ -0.86
Ss18Q62280 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
Ss18Q62280 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ss18Q62280 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.66□□□□□ -0.86
Ss18Q62280 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.66□□□□□ -0.86
Ss18Q62280 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.66□□□□□ -0.86
Ss18Q62280 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Pck2-205ENSMUST00000226352 2784 ntBASIC9.66□□□□□ -0.86
Ss18Q62280 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.66□□□□□ -0.86
Ss18Q62280 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.66□□□□□ -0.86
Ss18Q62280 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.66□□□□□ -0.86
Ss18Q62280 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Gm38294-201ENSMUST00000192831 381 ntBASIC9.66□□□□□ -0.86
Ss18Q62280 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.66□□□□□ -0.86
Ss18Q62280 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ss18Q62280 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms