Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Sybu-209ENSMUST00000228639 4113 ntBASIC15.11■□□□□ 0.01
Scn9aQ62205 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Gm45550-201ENSMUST00000209380 946 ntBASIC15.1■□□□□ 0.01
Scn9aQ62205 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn9aQ62205 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Scn9aQ62205 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm23251-201ENSMUST00000103773 110 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Rmrp-201ENSMUST00000157463 271 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Scn9aQ62205 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.09■□□□□ 0.01
Scn9aQ62205 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn9aQ62205 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn9aQ62205 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Scn9aQ62205 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.08■□□□□ 0.01
Scn9aQ62205 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn9aQ62205 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.08■□□□□ 0.01
Scn9aQ62205 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.08■□□□□ 0
Scn9aQ62205 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scn9aQ62205 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.08■□□□□ 0
Scn9aQ62205 Gm28882-201ENSMUST00000185504 314 ntBASIC15.08■□□□□ 0
Scn9aQ62205 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.08■□□□□ 0
Scn9aQ62205 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.08■□□□□ 0
Scn9aQ62205 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms