Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx2Q61412 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx2Q61412 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm6244-201ENSMUST00000178732 841 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm8602-201ENSMUST00000184045 607 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx2Q61412 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.78□□□□□ -0.36
Vsx2Q61412 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx2Q61412 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.77□□□□□ -0.36
Vsx2Q61412 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vsx2Q61412 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx2Q61412 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vsx2Q61412 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Mir1894-201ENSMUST00000122802 81 ntBASIC12.77□□□□□ -0.37
Vsx2Q61412 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.77□□□□□ -0.37
Vsx2Q61412 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vsx2Q61412 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Gm5035-201ENSMUST00000215581 927 ntBASIC12.77□□□□□ -0.37
Vsx2Q61412 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.77□□□□□ -0.37
Vsx2Q61412 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.77□□□□□ -0.37
Vsx2Q61412 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx2Q61412 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx2Q61412 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm18187-201ENSMUST00000196476 984 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm38671-201ENSMUST00000200573 130 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms