Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.35□□□□□ -0.11
Col11a1Q61245 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.35□□□□□ -0.11
Col11a1Q61245 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col11a1Q61245 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm11340-201ENSMUST00000119226 412 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm11246-201ENSMUST00000120880 345 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.34□□□□□ -0.11
Col11a1Q61245 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm5455-201ENSMUST00000058710 715 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col11a1Q61245 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm4482-201ENSMUST00000200876 742 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Gm45398-201ENSMUST00000210561 165 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col11a1Q61245 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.34□□□□□ -0.11
Col11a1Q61245 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col11a1Q61245 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col11a1Q61245 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col11a1Q61245 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Col11a1Q61245 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col11a1Q61245 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col11a1Q61245 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.33□□□□□ -0.12
Col11a1Q61245 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.33□□□□□ -0.12
Col11a1Q61245 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Col11a1Q61245 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col11a1Q61245 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a1Q61245 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.32□□□□□ -0.12
Col11a1Q61245 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a1Q61245 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.32□□□□□ -0.12
Col11a1Q61245 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a1Q61245 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms