Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ClpbQ60649 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.59□□□□□ -0.39
ClpbQ60649 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.59□□□□□ -0.39
ClpbQ60649 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.59□□□□□ -0.39
ClpbQ60649 Gm18062-201ENSMUST00000208020 547 ntBASIC12.59□□□□□ -0.39
ClpbQ60649 Gm18055-201ENSMUST00000208254 547 ntBASIC12.59□□□□□ -0.39
ClpbQ60649 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.59□□□□□ -0.39
ClpbQ60649 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ClpbQ60649 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.59□□□□□ -0.39
ClpbQ60649 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.59□□□□□ -0.39
ClpbQ60649 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ClpbQ60649 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.59□□□□□ -0.39
ClpbQ60649 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
ClpbQ60649 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ClpbQ60649 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ClpbQ60649 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ClpbQ60649 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ClpbQ60649 Mir874-201ENSMUST00000104769 76 ntBASIC12.58□□□□□ -0.4
ClpbQ60649 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.58□□□□□ -0.4
ClpbQ60649 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.58□□□□□ -0.4
ClpbQ60649 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.58□□□□□ -0.4
ClpbQ60649 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ClpbQ60649 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.58□□□□□ -0.4
ClpbQ60649 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.58□□□□□ -0.4
ClpbQ60649 Gm18473-201ENSMUST00000220543 868 ntBASIC12.58□□□□□ -0.4
ClpbQ60649 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Gm25857-201ENSMUST00000082788 129 ntBASIC12.58□□□□□ -0.4
ClpbQ60649 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ClpbQ60649 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.58□□□□□ -0.4
ClpbQ60649 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ClpbQ60649 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClpbQ60649 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ClpbQ60649 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ClpbQ60649 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Gm11814-201ENSMUST00000119515 929 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 Gm13829-201ENSMUST00000119600 138 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.57□□□□□ -0.4
ClpbQ60649 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.57□□□□□ -0.4
ClpbQ60649 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms