Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tsr1Q5SWD9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tsr1Q5SWD9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsr1Q5SWD9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm12151-201ENSMUST00000121374 290 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 AC129323.1-201ENSMUST00000216733 470 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tsr1Q5SWD9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tsr1Q5SWD9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tsr1Q5SWD9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tsr1Q5SWD9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms