Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37042-201ENSMUST00000193816 581 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm19163-201ENSMUST00000223313 780 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps54Q5SPW0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm22018-201ENSMUST00000104357 131 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm13392-201ENSMUST00000117708 150 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm5370-201ENSMUST00000187187 574 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps54Q5SPW0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm25261-201ENSMUST00000157416 134 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm17208-201ENSMUST00000168388 535 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm43630-201ENSMUST00000201550 776 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps54Q5SPW0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Snord83b-201ENSMUST00000104546 94 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gm25927-201ENSMUST00000175058 117 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms