Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spire1Q52KF3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Spire1Q52KF3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.31□□□□□ -0.28
Spire1Q52KF3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Spire1Q52KF3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm2383-201ENSMUST00000181461 807 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.3□□□□□ -0.28
Spire1Q52KF3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.3□□□□□ -0.28
Spire1Q52KF3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms