Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38aQ4FK66 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gm24548-201ENSMUST00000158650 108 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gm5781-201ENSMUST00000219792 443 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gm8227-201ENSMUST00000223306 571 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38aQ4FK66 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38aQ4FK66 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Gm13342-201ENSMUST00000121055 207 ntBASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38aQ4FK66 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm12241-201ENSMUST00000118330 726 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm13297-201ENSMUST00000120205 934 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms