Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22065-201ENSMUST00000103753 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22066-201ENSMUST00000103761 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24932-201ENSMUST00000103763 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24115-201ENSMUST00000103799 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22190-201ENSMUST00000103827 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22191-201ENSMUST00000103831 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24721-201ENSMUST00000103849 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm28018-201ENSMUST00000103869 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm26399-201ENSMUST00000103937 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm12585-201ENSMUST00000117307 290 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25349-201ENSMUST00000177728 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm23616-201ENSMUST00000177797 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25871-201ENSMUST00000177816 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24752-201ENSMUST00000178240 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24496-201ENSMUST00000178287 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25649-201ENSMUST00000178476 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25548-201ENSMUST00000178681 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm23147-201ENSMUST00000178841 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm26095-201ENSMUST00000179270 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22171-201ENSMUST00000179283 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm23936-201ENSMUST00000179354 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm22619-201ENSMUST00000179516 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25255-201ENSMUST00000179579 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24755-201ENSMUST00000179691 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm26506-201ENSMUST00000179692 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm25086-201ENSMUST00000179931 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm23243-201ENSMUST00000180047 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24659-201ENSMUST00000180212 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm24169-201ENSMUST00000180244 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm23689-201ENSMUST00000180354 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm27359-201ENSMUST00000184153 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm27785-201ENSMUST00000184268 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm27466-201ENSMUST00000184396 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm27703-201ENSMUST00000184836 110 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm28630-201ENSMUST00000187806 498 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm46209-201ENSMUST00000217912 553 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cnga4Q3UW12 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cnga4Q3UW12 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm24158-201ENSMUST00000175263 71 ntBASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm43514-201ENSMUST00000198852 424 ntBASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms